If the STMS buffer cleanup automatically after adding transport & you cannot see any TR in STMS_IMPORT screen and the buffer file shows :
#1/_TASK CLITRELESAPUSER EXL W H A I r0 C r1 0 V R G < K T t r5 umodes ASCL20130828182513000 00000PROJECT P033 A # buffer cleaned on 20160824182513
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You can also find the same thing in TP log. it shows cleanup run in last.
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Resolution
Please cross check that all systems in STMS Path should be on same transport group – (GROUP_SID). Change the same & redistribute it.